Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh17E9PXF0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh17E9PXF0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Pcdh17E9PXF0 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.58■□□□□ 0.57
Pcdh17E9PXF0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdh17E9PXF0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh17E9PXF0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdh17E9PXF0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh17E9PXF0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh17E9PXF0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh17E9PXF0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh17E9PXF0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdh17E9PXF0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh17E9PXF0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Gm26833-201ENSMUST00000180899 440 ntBASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh17E9PXF0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh17E9PXF0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh17E9PXF0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdh17E9PXF0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh17E9PXF0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh17E9PXF0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh17E9PXF0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh17E9PXF0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms