Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank1D3YZU1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.96■□□□□ 0.47
Shank1D3YZU1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank1D3YZU1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank1D3YZU1 Gm13234-201ENSMUST00000120010 747 ntBASIC17.96■□□□□ 0.47
Shank1D3YZU1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shank1D3YZU1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.96■□□□□ 0.47
Shank1D3YZU1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Shank1D3YZU1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank1D3YZU1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank1D3YZU1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Shank1D3YZU1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Shank1D3YZU1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.96■□□□□ 0.46
Shank1D3YZU1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
Shank1D3YZU1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Shank1D3YZU1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank1D3YZU1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Gm9988-201ENSMUST00000069786 435 ntBASIC17.94■□□□□ 0.46
Shank1D3YZU1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank1D3YZU1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank1D3YZU1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Gm4968-201ENSMUST00000071458 858 ntBASIC17.93■□□□□ 0.46
Shank1D3YZU1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank1D3YZU1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank1D3YZU1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.92■□□□□ 0.46
Shank1D3YZU1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank1D3YZU1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Gm13148-201ENSMUST00000118892 745 ntBASIC17.91■□□□□ 0.46
Shank1D3YZU1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.91■□□□□ 0.46
Shank1D3YZU1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shank1D3YZU1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shank1D3YZU1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank1D3YZU1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shank1D3YZU1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank1D3YZU1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank1D3YZU1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.9■□□□□ 0.46
Shank1D3YZU1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Shank1D3YZU1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.9■□□□□ 0.46
Shank1D3YZU1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank1D3YZU1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank1D3YZU1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Shank1D3YZU1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms