Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.26■□□□□ 0.83
Gm5640A3KG49 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5640A3KG49 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5640A3KG49 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm5640A3KG49 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm5640A3KG49 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5640A3KG49 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm5640A3KG49 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5640A3KG49 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5640A3KG49 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Gm5640A3KG49 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.24■□□□□ 0.83
Gm5640A3KG49 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5640A3KG49 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5640A3KG49 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5640A3KG49 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5640A3KG49 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5640A3KG49 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5640A3KG49 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5640A3KG49 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5640A3KG49 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5640A3KG49 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5640A3KG49 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Gm11687-201ENSMUST00000118911 886 ntBASIC20.22■□□□□ 0.83
Gm5640A3KG49 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5640A3KG49 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5640A3KG49 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5640A3KG49 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5640A3KG49 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5640A3KG49 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5640A3KG49 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5640A3KG49 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5640A3KG49 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5640A3KG49 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5640A3KG49 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5640A3KG49 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5640A3KG49 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5640A3KG49 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5640A3KG49 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5640A3KG49 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.18■□□□□ 0.82
Gm5640A3KG49 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5640A3KG49 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm5640A3KG49 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.15■□□□□ 0.82
Gm5640A3KG49 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5640A3KG49 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms