Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Gm4968-201ENSMUST00000071458 858 ntBASIC16.9■□□□□ 0.3
Col6a4A2AX52 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a4A2AX52 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.9■□□□□ 0.3
Col6a4A2AX52 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col6a4A2AX52 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Col6a4A2AX52 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a4A2AX52 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a4A2AX52 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Gm12527-201ENSMUST00000117967 564 ntBASIC16.87■□□□□ 0.29
Col6a4A2AX52 Gm13148-201ENSMUST00000118892 745 ntBASIC16.87■□□□□ 0.29
Col6a4A2AX52 Gm13234-201ENSMUST00000120010 747 ntBASIC16.87■□□□□ 0.29
Col6a4A2AX52 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Gm22240-201ENSMUST00000175225 82 ntBASIC16.87■□□□□ 0.29
Col6a4A2AX52 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a4A2AX52 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.86■□□□□ 0.29
Col6a4A2AX52 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a4A2AX52 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Gm9988-201ENSMUST00000069786 435 ntBASIC16.85■□□□□ 0.29
Col6a4A2AX52 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Col6a4A2AX52 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a4A2AX52 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col6a4A2AX52 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.84■□□□□ 0.29
Col6a4A2AX52 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.84■□□□□ 0.29
Col6a4A2AX52 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.84■□□□□ 0.29
Col6a4A2AX52 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Gm10653-202ENSMUST00000139570 835 ntBASIC16.84■□□□□ 0.29
Col6a4A2AX52 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms