Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IsxA1A546 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IsxA1A546 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.55■□□□□ 0.56
IsxA1A546 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.55■□□□□ 0.56
IsxA1A546 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
IsxA1A546 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IsxA1A546 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
IsxA1A546 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IsxA1A546 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
IsxA1A546 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.54■□□□□ 0.56
IsxA1A546 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IsxA1A546 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
IsxA1A546 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IsxA1A546 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
IsxA1A546 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IsxA1A546 Rarb-207ENSMUST00000225921 2756 ntBASIC18.53■□□□□ 0.56
IsxA1A546 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IsxA1A546 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IsxA1A546 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.52■□□□□ 0.56
IsxA1A546 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IsxA1A546 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.52■□□□□ 0.56
IsxA1A546 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IsxA1A546 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
IsxA1A546 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
IsxA1A546 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IsxA1A546 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
IsxA1A546 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IsxA1A546 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IsxA1A546 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IsxA1A546 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.51■□□□□ 0.55
IsxA1A546 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IsxA1A546 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IsxA1A546 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IsxA1A546 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IsxA1A546 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
IsxA1A546 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IsxA1A546 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.51■□□□□ 0.55
IsxA1A546 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IsxA1A546 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IsxA1A546 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
IsxA1A546 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.5■□□□□ 0.55
IsxA1A546 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IsxA1A546 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IsxA1A546 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IsxA1A546 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IsxA1A546 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IsxA1A546 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
IsxA1A546 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.49■□□□□ 0.55
IsxA1A546 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IsxA1A546 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IsxA1A546 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
IsxA1A546 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IsxA1A546 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
IsxA1A546 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IsxA1A546 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
IsxA1A546 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Gm7332-201ENSMUST00000118351 454 ntBASIC18.48■□□□□ 0.55
IsxA1A546 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.48■□□□□ 0.55
IsxA1A546 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IsxA1A546 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IsxA1A546 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms