Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-1A0N8R1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav12-1A0N8R1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-1A0N8R1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav12-1A0N8R1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-1A0N8R1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav12-1A0N8R1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-1A0N8R1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12-1A0N8R1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12-1A0N8R1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.73■□□□□ 0.27
Trav12-1A0N8R1 Gm7143-201ENSMUST00000222811 859 ntBASIC16.73■□□□□ 0.27
Trav12-1A0N8R1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12-1A0N8R1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12-1A0N8R1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12-1A0N8R1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-1A0N8R1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Gm10232-201ENSMUST00000089221 720 ntBASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav12-1A0N8R1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav12-1A0N8R1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trav12-1A0N8R1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav12-1A0N8R1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-1A0N8R1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-1A0N8R1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12-1A0N8R1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12-1A0N8R1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.66■□□□□ 0.26
Trav12-1A0N8R1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms