Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.11■□□□□ 0.49
Smim17A0A504 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim17A0A504 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.11■□□□□ 0.49
Smim17A0A504 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smim17A0A504 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smim17A0A504 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim17A0A504 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim17A0A504 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim17A0A504 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.1■□□□□ 0.49
Smim17A0A504 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Smim17A0A504 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smim17A0A504 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Smim17A0A504 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Rarb-207ENSMUST00000225921 2756 ntBASIC18.1■□□□□ 0.49
Smim17A0A504 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim17A0A504 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Smim17A0A504 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Smim17A0A504 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim17A0A504 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.09■□□□□ 0.49
Smim17A0A504 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smim17A0A504 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.08■□□□□ 0.49
Smim17A0A504 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smim17A0A504 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smim17A0A504 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.08■□□□□ 0.48
Smim17A0A504 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smim17A0A504 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smim17A0A504 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smim17A0A504 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smim17A0A504 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.07■□□□□ 0.48
Smim17A0A504 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Smim17A0A504 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Smim17A0A504 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim17A0A504 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.07■□□□□ 0.48
Smim17A0A504 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Smim17A0A504 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim17A0A504 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smim17A0A504 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim17A0A504 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smim17A0A504 Gm45364-201ENSMUST00000210883 159 ntBASIC18.06■□□□□ 0.48
Smim17A0A504 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smim17A0A504 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim17A0A504 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim17A0A504 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim17A0A504 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smim17A0A504 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Smim17A0A504 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Smim17A0A504 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim17A0A504 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smim17A0A504 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smim17A0A504 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smim17A0A504 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smim17A0A504 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smim17A0A504 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.04■□□□□ 0.48
Smim17A0A504 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.04■□□□□ 0.48
Smim17A0A504 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smim17A0A504 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smim17A0A504 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smim17A0A504 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smim17A0A504 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Smim17A0A504 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smim17A0A504 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smim17A0A504 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smim17A0A504 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.03■□□□□ 0.48
Smim17A0A504 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Smim17A0A504 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smim17A0A504 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smim17A0A504 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms