Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcna-ps2A0A140T8V5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcna-ps2A0A140T8V5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcna-ps2A0A140T8V5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcna-ps2A0A140T8V5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcna-ps2A0A140T8V5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcna-ps2A0A140T8V5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcna-ps2A0A140T8V5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcna-ps2A0A140T8V5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcna-ps2A0A140T8V5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcna-ps2A0A140T8V5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcna-ps2A0A140T8V5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Pcna-ps2A0A140T8V5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcna-ps2A0A140T8V5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcna-ps2A0A140T8V5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcna-ps2A0A140T8V5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gm22238-201ENSMUST00000175222 88 ntBASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Pcna-ps2A0A140T8V5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcna-ps2A0A140T8V5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcna-ps2A0A140T8V5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcna-ps2A0A140T8V5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcna-ps2A0A140T8V5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcna-ps2A0A140T8V5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms