Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-2A0A140T8N6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-2A0A140T8N6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-2A0A140T8N6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-2A0A140T8N6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-2A0A140T8N6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-2A0A140T8N6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-2A0A140T8N6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms