Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl13a-ps1A0A140T8K2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl13a-ps1A0A140T8K2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rpl13a-ps1A0A140T8K2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl13a-ps1A0A140T8K2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Notumos-201ENSMUST00000151998 2659 ntBASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.7■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gm26833-201ENSMUST00000180899 440 ntBASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Spcs1-204ENSMUST00000226782 949 ntBASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl13a-ps1A0A140T8K2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Gm12251-201ENSMUST00000117893 792 ntBASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpl13a-ps1A0A140T8K2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms