Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Frmpd3A0A140LIW3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Frmpd3A0A140LIW3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
Frmpd3A0A140LIW3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Frmpd3A0A140LIW3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
Frmpd3A0A140LIW3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Frmpd3A0A140LIW3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Frmpd3A0A140LIW3 Gm22240-201ENSMUST00000175225 82 ntBASIC24.41■■□□□ 1.5
Frmpd3A0A140LIW3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Frmpd3A0A140LIW3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Frmpd3A0A140LIW3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Frmpd3A0A140LIW3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Frmpd3A0A140LIW3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Frmpd3A0A140LIW3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Frmpd3A0A140LIW3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Frmpd3A0A140LIW3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Frmpd3A0A140LIW3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Frmpd3A0A140LIW3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
Frmpd3A0A140LIW3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Frmpd3A0A140LIW3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Frmpd3A0A140LIW3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.39■■□□□ 1.49
Frmpd3A0A140LIW3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Frmpd3A0A140LIW3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Frmpd3A0A140LIW3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Frmpd3A0A140LIW3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Frmpd3A0A140LIW3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.38■■□□□ 1.49
Frmpd3A0A140LIW3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.38■■□□□ 1.49
Frmpd3A0A140LIW3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.38■■□□□ 1.49
Frmpd3A0A140LIW3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Frmpd3A0A140LIW3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Frmpd3A0A140LIW3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Frmpd3A0A140LIW3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Frmpd3A0A140LIW3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Frmpd3A0A140LIW3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Frmpd3A0A140LIW3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Frmpd3A0A140LIW3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Frmpd3A0A140LIW3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Frmpd3A0A140LIW3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Frmpd3A0A140LIW3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Frmpd3A0A140LIW3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Frmpd3A0A140LIW3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Frmpd3A0A140LIW3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Frmpd3A0A140LIW3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Frmpd3A0A140LIW3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.35■■□□□ 1.49
Frmpd3A0A140LIW3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Gm13168-201ENSMUST00000121771 632 ntBASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.34■■□□□ 1.49
Frmpd3A0A140LIW3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Frmpd3A0A140LIW3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Frmpd3A0A140LIW3 Gm8520-201ENSMUST00000186517 868 ntBASIC24.33■■□□□ 1.49
Frmpd3A0A140LIW3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.33■■□□□ 1.49
Frmpd3A0A140LIW3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.32■■□□□ 1.48
Frmpd3A0A140LIW3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.31■■□□□ 1.48
Frmpd3A0A140LIW3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Frmpd3A0A140LIW3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Frmpd3A0A140LIW3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Frmpd3A0A140LIW3 Gm22325-201ENSMUST00000158904 308 ntBASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Gm13146-201ENSMUST00000118508 780 ntBASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Gm5408-201ENSMUST00000197998 747 ntBASIC24.29■■□□□ 1.48
Frmpd3A0A140LIW3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Frmpd3A0A140LIW3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms