Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Ccdc194A0A140LIT1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc194A0A140LIT1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc194A0A140LIT1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc194A0A140LIT1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc194A0A140LIT1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc194A0A140LIT1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc194A0A140LIT1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc194A0A140LIT1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc194A0A140LIT1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc194A0A140LIT1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc194A0A140LIT1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc194A0A140LIT1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc194A0A140LIT1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc194A0A140LIT1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc194A0A140LIT1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.85■□□□□ 0.77
Ccdc194A0A140LIT1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc194A0A140LIT1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc194A0A140LIT1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc194A0A140LIT1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc194A0A140LIT1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc194A0A140LIT1 Gm15820-201ENSMUST00000201566 728 ntBASIC19.83■□□□□ 0.77
Ccdc194A0A140LIT1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc194A0A140LIT1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc194A0A140LIT1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc194A0A140LIT1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ccdc194A0A140LIT1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc194A0A140LIT1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc194A0A140LIT1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc194A0A140LIT1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc194A0A140LIT1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc194A0A140LIT1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc194A0A140LIT1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc194A0A140LIT1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc194A0A140LIT1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc194A0A140LIT1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc194A0A140LIT1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms