Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav23A0A0G2JG17 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav23A0A0G2JG17 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.27■□□□□ 0.19
Trav23A0A0G2JG17 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav23A0A0G2JG17 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Trav23A0A0G2JG17 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav23A0A0G2JG17 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav23A0A0G2JG17 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav23A0A0G2JG17 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Gm21956-201ENSMUST00000179946 522 ntBASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav23A0A0G2JG17 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav23A0A0G2JG17 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav23A0A0G2JG17 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav23A0A0G2JG17 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav23A0A0G2JG17 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms