Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.4■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tcrg-V3A0A0G2JEW2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tcrg-V3A0A0G2JEW2 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.33■□□□□ 0.68
Tcrg-V3A0A0G2JEW2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcrg-V3A0A0G2JEW2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tcrg-V3A0A0G2JEW2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcrg-V3A0A0G2JEW2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.33■□□□□ 0.68
Tcrg-V3A0A0G2JEW2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tcrg-V3A0A0G2JEW2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms