Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm43566-201ENSMUST00000196851 808 ntBASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv16A0A0B4J1H3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trbv16A0A0B4J1H3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv16A0A0B4J1H3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm7143-201ENSMUST00000222811 859 ntBASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv16A0A0B4J1H3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv16A0A0B4J1H3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv16A0A0B4J1H3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv16A0A0B4J1H3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Gm5921-201ENSMUST00000075898 882 ntBASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms