Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-42A0A0A6YY38 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-42A0A0A6YY38 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.58■□□□□ 0.56
Ighv1-42A0A0A6YY38 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-42A0A0A6YY38 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-42A0A0A6YY38 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-42A0A0A6YY38 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Ighv1-42A0A0A6YY38 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-42A0A0A6YY38 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Ighv1-42A0A0A6YY38 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-42A0A0A6YY38 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-42A0A0A6YY38 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-42A0A0A6YY38 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-42A0A0A6YY38 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-42A0A0A6YY38 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Gm42642-201ENSMUST00000200683 355 ntBASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-42A0A0A6YY38 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-42A0A0A6YY38 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.52■□□□□ 0.56
Ighv1-42A0A0A6YY38 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-42A0A0A6YY38 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-42A0A0A6YY38 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-42A0A0A6YY38 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-42A0A0A6YY38 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-42A0A0A6YY38 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Ighv1-42A0A0A6YY38 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-42A0A0A6YY38 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.51■□□□□ 0.55
Ighv1-42A0A0A6YY38 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-42A0A0A6YY38 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-42A0A0A6YY38 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-42A0A0A6YY38 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-42A0A0A6YY38 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-42A0A0A6YY38 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-42A0A0A6YY38 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-42A0A0A6YY38 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-42A0A0A6YY38 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-42A0A0A6YY38 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-42A0A0A6YY38 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.48■□□□□ 0.55
Ighv1-42A0A0A6YY38 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms