Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv3-4A0A0A6YXF1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gm10602-201ENSMUST00000098239 609 ntBASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gm27011-201ENSMUST00000182352 972 ntBASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.61■□□□□ 0.25
Ighv3-4A0A0A6YXF1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms