Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ighv1-20A0A0A6YX66 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-20A0A0A6YX66 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-20A0A0A6YX66 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Spcs1-204ENSMUST00000226782 949 ntBASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-20A0A0A6YX66 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm43017-201ENSMUST00000198296 752 ntBASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.17■□□□□ 0.18
Ighv1-20A0A0A6YX66 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-20A0A0A6YX66 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-20A0A0A6YX66 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm12251-201ENSMUST00000117893 792 ntBASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-20A0A0A6YX66 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm43173-201ENSMUST00000202246 593 ntBASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms