Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28778A0A087WSK7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28778A0A087WSK7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28778A0A087WSK7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28778A0A087WSK7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28778A0A087WSK7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28778A0A087WSK7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.27■□□□□ 0.19
Gm28778A0A087WSK7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28778A0A087WSK7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28778A0A087WSK7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28778A0A087WSK7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm28778A0A087WSK7 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.24■□□□□ 0.19
Gm28778A0A087WSK7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Notumos-201ENSMUST00000151998 2659 ntBASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28778A0A087WSK7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28778A0A087WSK7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28778A0A087WSK7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm28778A0A087WSK7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28778A0A087WSK7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm28778A0A087WSK7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28778A0A087WSK7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.2■□□□□ 0.18
Gm28778A0A087WSK7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28778A0A087WSK7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28778A0A087WSK7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28778A0A087WSK7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms