Protein–RNA interactions for Protein: A0A087WQ54

Gm28285, Predicted gene 28285 (Fragment), mousemouse

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28285A0A087WQ54 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28285A0A087WQ54 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm28285A0A087WQ54 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28285A0A087WQ54 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28285A0A087WQ54 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.33■□□□□ 0.2
Gm28285A0A087WQ54 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28285A0A087WQ54 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28285A0A087WQ54 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Gm28285A0A087WQ54 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28285A0A087WQ54 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Gm9806-201ENSMUST00000051080 552 ntBASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Gm6311-201ENSMUST00000073790 878 ntBASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm28285A0A087WQ54 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm28285A0A087WQ54 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28285A0A087WQ54 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28285A0A087WQ54 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28285A0A087WQ54 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28285A0A087WQ54 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28285A0A087WQ54 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28285A0A087WQ54 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28285A0A087WQ54 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28285A0A087WQ54 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28285A0A087WQ54 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28285A0A087WQ54 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28285A0A087WQ54 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.26■□□□□ 0.19
Gm28285A0A087WQ54 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm28285A0A087WQ54 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28285A0A087WQ54 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28285A0A087WQ54 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms