Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Golph3-202ENSMUST00000226517 2359 ntBASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms