Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28897A0A087WP44 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.68■□□□□ 0.42
Gm28897A0A087WP44 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Golph3-202ENSMUST00000226517 2359 ntBASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28897A0A087WP44 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28897A0A087WP44 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28897A0A087WP44 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28897A0A087WP44 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28897A0A087WP44 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28897A0A087WP44 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm28897A0A087WP44 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms