Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-4-dv7A0A075B6C2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Trav13-4-dv7A0A075B6C2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-4-dv7A0A075B6C2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms