Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-1A0A075B699 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-1A0A075B699 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-1A0A075B699 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-1A0A075B699 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-1A0A075B699 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav9d-1A0A075B699 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav9d-1A0A075B699 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav9d-1A0A075B699 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-1A0A075B699 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav9d-1A0A075B699 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-1A0A075B699 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-1A0A075B699 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-1A0A075B699 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9d-1A0A075B699 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms