Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.33■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms