Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trav4d-3A0A075B625 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav4d-3A0A075B625 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Gm44428-201ENSMUST00000204474 874 ntBASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Trav4d-3A0A075B625 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4d-3A0A075B625 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.58□□□□□ -0.23
Trav4d-3A0A075B625 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav4d-3A0A075B625 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav4d-3A0A075B625 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Gm45364-201ENSMUST00000210883 159 ntBASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4d-3A0A075B625 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4d-3A0A075B625 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4d-3A0A075B625 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav4d-3A0A075B625 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC13.57□□□□□ -0.24
Trav4d-3A0A075B625 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4d-3A0A075B625 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4d-3A0A075B625 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms