Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Zc3h3Q8CHP0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Zc3h3Q8CHP0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Zc3h3Q8CHP0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Zc3h3Q8CHP0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Zc3h3Q8CHP0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Zc3h3Q8CHP0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Zc3h3Q8CHP0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Zc3h3Q8CHP0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Zc3h3Q8CHP0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Zc3h3Q8CHP0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Zc3h3Q8CHP0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Zc3h3Q8CHP0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Zc3h3Q8CHP0 Gm9397-201ENSMUST00000200125 605 ntBASIC26.98■■□□□ 1.91
Zc3h3Q8CHP0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Zc3h3Q8CHP0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
Zc3h3Q8CHP0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.93■■□□□ 1.9
Zc3h3Q8CHP0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Zc3h3Q8CHP0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Zc3h3Q8CHP0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Zc3h3Q8CHP0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Zc3h3Q8CHP0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Zc3h3Q8CHP0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Zc3h3Q8CHP0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
Zc3h3Q8CHP0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.88■■□□□ 1.89
Zc3h3Q8CHP0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Zc3h3Q8CHP0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Zc3h3Q8CHP0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Zc3h3Q8CHP0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.86■■□□□ 1.89
Zc3h3Q8CHP0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.85■■□□□ 1.89
Zc3h3Q8CHP0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Zc3h3Q8CHP0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Zc3h3Q8CHP0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.81■■□□□ 1.88
Zc3h3Q8CHP0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3h3Q8CHP0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.79■■□□□ 1.88
Zc3h3Q8CHP0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Zc3h3Q8CHP0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h3Q8CHP0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.74■■□□□ 1.87
Zc3h3Q8CHP0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.73■■□□□ 1.87
Zc3h3Q8CHP0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Zc3h3Q8CHP0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Zc3h3Q8CHP0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.71■■□□□ 1.87
Zc3h3Q8CHP0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Zc3h3Q8CHP0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.69■■□□□ 1.86
Zc3h3Q8CHP0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.66■■□□□ 1.86
Zc3h3Q8CHP0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Zc3h3Q8CHP0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Zc3h3Q8CHP0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Zc3h3Q8CHP0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
Zc3h3Q8CHP0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Zc3h3Q8CHP0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.62■■□□□ 1.85
Zc3h3Q8CHP0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Zc3h3Q8CHP0 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.6■■□□□ 1.85
Zc3h3Q8CHP0 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.6■■□□□ 1.85
Zc3h3Q8CHP0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Zc3h3Q8CHP0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Zc3h3Q8CHP0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.53■■□□□ 1.84
Zc3h3Q8CHP0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Zc3h3Q8CHP0 Gm8503-201ENSMUST00000118131 455 ntBASIC26.5■■□□□ 1.83
Zc3h3Q8CHP0 Gm24970-201ENSMUST00000175582 82 ntBASIC26.5■■□□□ 1.83
Zc3h3Q8CHP0 Mipep-204ENSMUST00000225043 1548 ntBASIC26.49■■□□□ 1.83
Zc3h3Q8CHP0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Zc3h3Q8CHP0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.49■■□□□ 1.83
Zc3h3Q8CHP0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Zc3h3Q8CHP0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Zc3h3Q8CHP0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Zc3h3Q8CHP0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Zc3h3Q8CHP0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Zc3h3Q8CHP0 Gm6821-201ENSMUST00000107540 542 ntBASIC26.36■■□□□ 1.81
Zc3h3Q8CHP0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Zc3h3Q8CHP0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Zc3h3Q8CHP0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Zc3h3Q8CHP0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Zc3h3Q8CHP0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Zc3h3Q8CHP0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Zc3h3Q8CHP0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Zc3h3Q8CHP0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Zc3h3Q8CHP0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.23■■□□□ 1.79
Zc3h3Q8CHP0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.22■■□□□ 1.79
Zc3h3Q8CHP0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Zc3h3Q8CHP0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Zc3h3Q8CHP0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.17■■□□□ 1.78
Zc3h3Q8CHP0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.14■■□□□ 1.78
Zc3h3Q8CHP0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Zc3h3Q8CHP0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Zc3h3Q8CHP0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Zc3h3Q8CHP0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Zc3h3Q8CHP0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Zc3h3Q8CHP0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.09■■□□□ 1.77
Zc3h3Q8CHP0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Zc3h3Q8CHP0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Zc3h3Q8CHP0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Zc3h3Q8CHP0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Zc3h3Q8CHP0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.05■■□□□ 1.76
Zc3h3Q8CHP0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Zc3h3Q8CHP0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Zc3h3Q8CHP0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.03■■□□□ 1.76
Zc3h3Q8CHP0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Zc3h3Q8CHP0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Zc3h3Q8CHP0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms