Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gm10417-201ENSMUST00000194341 3522 ntBASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Mir5132-201ENSMUST00000175166 71 ntBASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gm27910-201ENSMUST00000185004 107 ntBASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gm45118-201ENSMUST00000208928 825 ntBASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp4cQ9D7F7 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm13284-201ENSMUST00000121020 547 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm38321-201ENSMUST00000195053 235 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm18561-201ENSMUST00000206027 804 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm18165-201ENSMUST00000217426 928 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Nln-205ENSMUST00000224945 2486 ntBASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Chmp4cQ9D7F7 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm12663-201ENSMUST00000118481 958 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm3828-201ENSMUST00000121817 257 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms