Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm12791-201ENSMUST00000120788 655 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Mir1896-201ENSMUST00000122641 81 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm9358-201ENSMUST00000183067 927 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Spata33-207ENSMUST00000212760 4074 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm12208-201ENSMUST00000122004 163 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm7880-201ENSMUST00000203748 871 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm33080-201ENSMUST00000205429 172 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm6991-201ENSMUST00000218475 1178 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.17□□□□□ -0.78
Clrn1Q8K445 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Clrn1Q8K445 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms