Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm22344-201ENSMUST00000122642 278 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc17Q8CE13 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Mir744-201ENSMUST00000103261 100 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm8019-201ENSMUST00000119317 587 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm14034-201ENSMUST00000120147 551 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm18733-202ENSMUST00000174447 401 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm33707-201ENSMUST00000195135 569 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms