Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Gm37852-201ENSMUST00000193027 350 ntBASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Mir7686-201ENSMUST00000200604 57 ntBASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Gm45398-201ENSMUST00000210561 165 ntBASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nhlrc3Q8CCH2 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Snord55-201ENSMUST00000174939 79 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm37905-201ENSMUST00000195310 341 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm19091-201ENSMUST00000208120 978 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Mt1-202ENSMUST00000211807 1085 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nhlrc3Q8CCH2 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Nhlrc3Q8CCH2 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Nhlrc3Q8CCH2 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.96
Nhlrc3Q8CCH2 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Nhlrc3Q8CCH2 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gm12217-201ENSMUST00000118858 696 ntBASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gm23045-201ENSMUST00000175041 96 ntBASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gm21092-201ENSMUST00000178995 955 ntBASIC9.08□□□□□ -0.96
Nhlrc3Q8CCH2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms