Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Mir1905-201ENSMUST00000122779 82 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Gm17192-201ENSMUST00000169031 511 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Gm22876-201ENSMUST00000175450 298 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Mir7035-201ENSMUST00000184713 82 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Gm28833-201ENSMUST00000189671 559 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Gm20781-201ENSMUST00000193154 693 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Gm21736-201ENSMUST00000195399 693 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim9Q8C7M3 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm25053-201ENSMUST00000103982 133 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm25922-201ENSMUST00000104281 130 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm24679-201ENSMUST00000158762 111 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm24514-201ENSMUST00000174961 285 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm42780-201ENSMUST00000197083 734 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm25053-202ENSMUST00000199731 132 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm45258-201ENSMUST00000210042 853 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim9Q8C7M3 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim9Q8C7M3 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Trim9Q8C7M3 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Trim9Q8C7M3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms