Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm25561-201ENSMUST00000104607 125 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm14108-201ENSMUST00000122234 494 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm5244-201ENSMUST00000164001 339 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm22876-201ENSMUST00000175450 298 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm5851-201ENSMUST00000194132 1204 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm18504-201ENSMUST00000220917 929 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 CR974487.1-201ENSMUST00000220984 413 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Gm6783-201ENSMUST00000120916 1437 ntBASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.97□□□□□ -0.17
Sf3b2Q3UJB0 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm11231-201ENSMUST00000117895 1706 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm23999-201ENSMUST00000158057 104 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm16184-201ENSMUST00000162324 573 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Ighv1-8-201ENSMUST00000192236 293 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm30652-201ENSMUST00000199103 430 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm42821-201ENSMUST00000199771 489 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Gm18749-201ENSMUST00000222410 692 ntBASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b2Q3UJB0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms