Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Trim63Q38HM4 Gm28760-201ENSMUST00000185995 736 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.8□□□□□ -1
Trim63Q38HM4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Gm8396-201ENSMUST00000057361 823 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trim63Q38HM4 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Rhoh-202ENSMUST00000201533 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Pycard-201ENSMUST00000033056 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Gm38148-201ENSMUST00000195166 3012 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trim63Q38HM4 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC8.8□□□□□ -1
Trim63Q38HM4 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Btnl5-ps-201ENSMUST00000097346 1751 ntBASIC8.79□□□□□ -1
Trim63Q38HM4 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Trim63Q38HM4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Trim63Q38HM4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Gm5834-201ENSMUST00000126680 1026 ntBASIC8.79□□□□□ -1
Trim63Q38HM4 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.79□□□□□ -1
Trim63Q38HM4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC8.79□□□□□ -1
Trim63Q38HM4 Gm5266-201ENSMUST00000187302 1162 ntBASIC8.79□□□□□ -1
Trim63Q38HM4 Gm42937-201ENSMUST00000197360 752 ntBASIC8.79□□□□□ -1
Trim63Q38HM4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC8.79□□□□□ -1
Trim63Q38HM4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Trim63Q38HM4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC8.79□□□□□ -1
Trim63Q38HM4 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Ces5a-201ENSMUST00000077816 1728 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Gm43795-201ENSMUST00000202051 2366 ntBASIC8.79□□□□□ -1
Trim63Q38HM4 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC8.79□□□□□ -1
Trim63Q38HM4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim63Q38HM4 Ces2c-201ENSMUST00000055052 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Tfrc-202ENSMUST00000120680 1860 ntTSL 2 BASIC8.79□□□□□ -1
Trim63Q38HM4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 C6-204ENSMUST00000162585 2876 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim63Q38HM4 AC157476.2-201ENSMUST00000217574 3200 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Krba1-208ENSMUST00000203371 4000 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Mmel1-201ENSMUST00000079269 2934 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trim63Q38HM4 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Eef1d-218ENSMUST00000154584 1721 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms