Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm37048-201ENSMUST00000194827 5578 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm4900-201ENSMUST00000222046 1628 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm14398-201ENSMUST00000117287 1073 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm8111-201ENSMUST00000117659 987 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm15374-201ENSMUST00000119313 844 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm13937-201ENSMUST00000121000 988 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm4917-201ENSMUST00000121452 650 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm10169-201ENSMUST00000121822 348 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm15744-201ENSMUST00000161734 213 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm21778-201ENSMUST00000178779 471 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Mir6407-201ENSMUST00000184510 101 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Mrip-ps-201ENSMUST00000184613 940 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm9116-201ENSMUST00000192400 1018 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm44158-201ENSMUST00000203881 505 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 AC164618.2-201ENSMUST00000224770 573 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 AC159002.1-201ENSMUST00000226714 924 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Cdx4Q07424 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC8.37□□□□□ -1.07
Cdx4Q07424 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cdx4Q07424 Gm44369-201ENSMUST00000204543 2175 ntBASIC8.37□□□□□ -1.07
Cdx4Q07424 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 AC158636.1-201ENSMUST00000220118 1393 ntBASIC8.36□□□□□ -1.07
Cdx4Q07424 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cdx4Q07424 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC8.36□□□□□ -1.07
Cdx4Q07424 Gm44153-201ENSMUST00000204162 1580 ntBASIC8.36□□□□□ -1.07
Cdx4Q07424 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cdx4Q07424 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms