Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.69□□□□□ -0.54
CiitaP79621 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CiitaP79621 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Gm12397-201ENSMUST00000117674 615 ntBASIC11.69□□□□□ -0.54
CiitaP79621 Gm15036-201ENSMUST00000118880 400 ntBASIC11.69□□□□□ -0.54
CiitaP79621 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
CiitaP79621 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.69□□□□□ -0.54
CiitaP79621 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.69□□□□□ -0.54
CiitaP79621 Gm25226-201ENSMUST00000158198 123 ntBASIC11.69□□□□□ -0.54
CiitaP79621 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Gm7985-201ENSMUST00000183329 981 ntBASIC11.69□□□□□ -0.54
CiitaP79621 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.69□□□□□ -0.54
CiitaP79621 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.69□□□□□ -0.54
CiitaP79621 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.69□□□□□ -0.54
CiitaP79621 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.69□□□□□ -0.54
CiitaP79621 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CiitaP79621 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CiitaP79621 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CiitaP79621 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
CiitaP79621 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
CiitaP79621 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CiitaP79621 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CiitaP79621 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CiitaP79621 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CiitaP79621 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Mir291b-201ENSMUST00000104838 79 ntBASIC11.68□□□□□ -0.54
CiitaP79621 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.68□□□□□ -0.54
CiitaP79621 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.68□□□□□ -0.54
CiitaP79621 Gm5526-201ENSMUST00000153604 423 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Gm26208-201ENSMUST00000158677 124 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CiitaP79621 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Gm5621-201ENSMUST00000187303 640 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.68□□□□□ -0.54
CiitaP79621 Gm38321-201ENSMUST00000195053 235 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Gm17889-201ENSMUST00000198410 598 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.68□□□□□ -0.54
CiitaP79621 BC080696-201ENSMUST00000202858 1218 ntBASIC11.68□□□□□ -0.54
CiitaP79621 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.68□□□□□ -0.54
CiitaP79621 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CiitaP79621 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CiitaP79621 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms