Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nup43P59235 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nup43P59235 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.21□□□□□ -0.77
Nup43P59235 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nup43P59235 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.21□□□□□ -0.77
Nup43P59235 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.21□□□□□ -0.77
Nup43P59235 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Nup43P59235 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.21□□□□□ -0.77
Nup43P59235 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.21□□□□□ -0.77
Nup43P59235 Gm26119-201ENSMUST00000175601 104 ntBASIC10.21□□□□□ -0.77
Nup43P59235 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC10.21□□□□□ -0.77
Nup43P59235 Mir7035-201ENSMUST00000184713 82 ntBASIC10.21□□□□□ -0.77
Nup43P59235 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Nup43P59235 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Gm38188-201ENSMUST00000192879 856 ntBASIC10.21□□□□□ -0.77
Nup43P59235 Gm43097-201ENSMUST00000196867 151 ntBASIC10.21□□□□□ -0.77
Nup43P59235 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Gm18466-201ENSMUST00000209147 499 ntBASIC10.21□□□□□ -0.77
Nup43P59235 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.21□□□□□ -0.77
Nup43P59235 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Nup43P59235 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Nup43P59235 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup43P59235 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Nup43P59235 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.21□□□□□ -0.78
Nup43P59235 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.21□□□□□ -0.78
Nup43P59235 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.21□□□□□ -0.78
Nup43P59235 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.21□□□□□ -0.78
Nup43P59235 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.21□□□□□ -0.78
Nup43P59235 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Nup43P59235 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.21□□□□□ -0.78
Nup43P59235 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup43P59235 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nup43P59235 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nup43P59235 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Nup43P59235 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nup43P59235 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Gm16518-201ENSMUST00000117960 508 ntBASIC10.2□□□□□ -0.78
Nup43P59235 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Mir1896-201ENSMUST00000122641 81 ntBASIC10.2□□□□□ -0.78
Nup43P59235 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Nup43P59235 Gm20392-201ENSMUST00000173047 701 ntBASIC10.2□□□□□ -0.78
Nup43P59235 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup43P59235 Gm38321-201ENSMUST00000195053 235 ntBASIC10.2□□□□□ -0.78
Nup43P59235 Gm5865-201ENSMUST00000198713 637 ntBASIC10.2□□□□□ -0.78
Nup43P59235 Gm19091-201ENSMUST00000208120 978 ntBASIC10.2□□□□□ -0.78
Nup43P59235 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms