Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdkn2bP55271 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn2bP55271 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn2bP55271 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Cdkn2bP55271 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Cdkn2bP55271 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.27□□□□□ -0.76
Cdkn2bP55271 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn2bP55271 Gm26670-201ENSMUST00000180429 3287 ntBASIC10.27□□□□□ -0.76
Cdkn2bP55271 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.76
Cdkn2bP55271 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cdkn2bP55271 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Cdkn2bP55271 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cdkn2bP55271 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Gm11824-201ENSMUST00000120191 846 ntBASIC10.27□□□□□ -0.77
Cdkn2bP55271 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cdkn2bP55271 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Gm33080-201ENSMUST00000205429 172 ntBASIC10.27□□□□□ -0.77
Cdkn2bP55271 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.27□□□□□ -0.77
Cdkn2bP55271 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.27□□□□□ -0.77
Cdkn2bP55271 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.27□□□□□ -0.77
Cdkn2bP55271 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.27□□□□□ -0.77
Cdkn2bP55271 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cdkn2bP55271 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.26□□□□□ -0.77
Cdkn2bP55271 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.26□□□□□ -0.77
Cdkn2bP55271 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm10731-201ENSMUST00000181171 448 ntBASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm29543-201ENSMUST00000188138 967 ntBASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdkn2bP55271 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms