Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm4806-201ENSMUST00000222704 1690 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sox18P43680 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Sox18P43680 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Sox18P43680 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Sox18P43680 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Gm26143-201ENSMUST00000104480 108 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC10.74□□□□□ -0.69
Sox18P43680 Gm8302-201ENSMUST00000119217 852 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Gm8152-201ENSMUST00000120842 637 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Gm14113-201ENSMUST00000121399 976 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Defa-ps17-201ENSMUST00000121849 171 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.74□□□□□ -0.69
Sox18P43680 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Gm24239-201ENSMUST00000157791 255 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sox18P43680 Gm27440-201ENSMUST00000184785 107 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.74□□□□□ -0.69
Sox18P43680 Gm38177-201ENSMUST00000192213 1040 ntBASIC10.74□□□□□ -0.69
Sox18P43680 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.74□□□□□ -0.69
Sox18P43680 Gm44636-201ENSMUST00000206130 755 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 AC161426.1-201ENSMUST00000214137 286 ntBASIC10.74□□□□□ -0.69
Sox18P43680 AC110816.1-201ENSMUST00000218559 980 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.74□□□□□ -0.69
Sox18P43680 Gm9102-201ENSMUST00000219250 465 ntBASIC10.74□□□□□ -0.69
Sox18P43680 AC132881.1-201ENSMUST00000223780 1062 ntBASIC10.74□□□□□ -0.69
Sox18P43680 AC107711.3-201ENSMUST00000228939 1035 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sox18P43680 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sox18P43680 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sox18P43680 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.74□□□□□ -0.69
Sox18P43680 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox18P43680 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Sox18P43680 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox18P43680 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Sox18P43680 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Sox18P43680 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm13284-201ENSMUST00000121020 547 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.73□□□□□ -0.69
Sox18P43680 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Gm16228-201ENSMUST00000162286 809 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm5529-201ENSMUST00000165691 891 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms