Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nfkb1P25799 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.15□□□□□ -0.63
Nfkb1P25799 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nfkb1P25799 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.15□□□□□ -0.63
Nfkb1P25799 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Nfkb1P25799 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm22594-201ENSMUST00000104251 130 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm22344-201ENSMUST00000122642 278 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm37723-201ENSMUST00000194480 565 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm6677-201ENSMUST00000195100 441 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm40414-201ENSMUST00000197608 481 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Nfkb1P25799 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.14□□□□□ -0.63
Nfkb1P25799 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.14□□□□□ -0.63
Nfkb1P25799 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm9791-201ENSMUST00000060997 447 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.14□□□□□ -0.63
Nfkb1P25799 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nfkb1P25799 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nfkb1P25799 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.13□□□□□ -0.63
Nfkb1P25799 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.13□□□□□ -0.63
Nfkb1P25799 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.13□□□□□ -0.63
Nfkb1P25799 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nfkb1P25799 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nfkb1P25799 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm16288-201ENSMUST00000137940 367 ntBASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm24074-201ENSMUST00000158178 260 ntBASIC11.13□□□□□ -0.63
Nfkb1P25799 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nfkb1P25799 Gm43564-201ENSMUST00000196185 211 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms