Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm8100-201ENSMUST00000182906 988 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Gm27438-201ENSMUST00000183480 110 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Gm3332-201ENSMUST00000189337 928 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Ighv1-48-201ENSMUST00000191795 294 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gm18539-201ENSMUST00000204745 1090 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Gm44551-201ENSMUST00000208804 171 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Cdx1P18111 D9Wsu149-201ENSMUST00000214169 594 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Gm15903-202ENSMUST00000199631 3518 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.75□□□□□ -1.01
Cdx1P18111 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Cdx1P18111 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Cdx1P18111 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cdx1P18111 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm37032-201ENSMUST00000194882 2975 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cdx1P18111 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cdx1P18111 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC8.74□□□□□ -1.01
Cdx1P18111 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cdx1P18111 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm14314-201ENSMUST00000118225 1015 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 Gm12208-201ENSMUST00000122004 163 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm10051-201ENSMUST00000145209 414 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cdx1P18111 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm5733-201ENSMUST00000190232 939 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 Gm18711-201ENSMUST00000199341 750 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm45550-201ENSMUST00000209380 946 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC8.74□□□□□ -1.01
Cdx1P18111 AC122408.1-201ENSMUST00000218949 218 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 AC154849.4-201ENSMUST00000224868 365 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 AC135469.1-201ENSMUST00000225984 772 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Cdx1P18111 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm9860-201ENSMUST00000211426 3653 ntBASIC8.74□□□□□ -1.01
Cdx1P18111 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cdx1P18111 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms