Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm18012-201ENSMUST00000204558 773 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Hoxd3P09027 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC8.78□□□□□ -1
Hoxd3P09027 AC123835.1-201ENSMUST00000214362 670 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC8.78□□□□□ -1
Hoxd3P09027 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm40598-201ENSMUST00000222953 547 ntBASIC8.78□□□□□ -1
Hoxd3P09027 AC123738.1-201ENSMUST00000224796 773 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Lgi3-203ENSMUST00000226548 1001 ntBASIC8.78□□□□□ -1
Hoxd3P09027 AC102368.1-201ENSMUST00000227161 892 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC8.78□□□□□ -1
Hoxd3P09027 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC8.78□□□□□ -1
Hoxd3P09027 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Hoxd3P09027 AC126257.2-201ENSMUST00000215507 2300 ntBASIC8.78□□□□□ -1
Hoxd3P09027 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Hoxd3P09027 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Hoxd3P09027 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
Hoxd3P09027 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC8.77□□□□□ -1
Hoxd3P09027 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.77□□□□□ -1
Hoxd3P09027 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Hoxd3P09027 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Hoxd3P09027 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Hoxd3P09027 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC8.77□□□□□ -1
Hoxd3P09027 Gm37542-201ENSMUST00000192563 2832 ntBASIC8.77□□□□□ -1
Hoxd3P09027 AC167022.1-201ENSMUST00000218647 1458 ntBASIC8.77□□□□□ -1
Hoxd3P09027 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Hoxd3P09027 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm12795-201ENSMUST00000117594 539 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm14892-201ENSMUST00000117636 267 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm14854-201ENSMUST00000117758 841 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm15782-201ENSMUST00000121073 445 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm25102-201ENSMUST00000122479 112 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC8.77□□□□□ -1.01
Hoxd3P09027 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm3052-201ENSMUST00000186409 829 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm44158-201ENSMUST00000203881 505 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm18561-201ENSMUST00000206027 804 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm45594-201ENSMUST00000211717 241 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm10688-201ENSMUST00000214985 520 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC8.77□□□□□ -1.01
Hoxd3P09027 AC166341.2-201ENSMUST00000220571 120 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms