Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm16165-201ENSMUST00000160140 795 ntBASIC9.09□□□□□ -0.95
Hoxa3P02831 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Gm17221-201ENSMUST00000163909 481 ntBASIC9.09□□□□□ -0.95
Hoxa3P02831 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Gm17073-201ENSMUST00000168069 556 ntBASIC9.09□□□□□ -0.95
Hoxa3P02831 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Hoxa3P02831 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.09□□□□□ -0.95
Hoxa3P02831 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.09□□□□□ -0.95
Hoxa3P02831 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.09□□□□□ -0.95
Hoxa3P02831 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.09□□□□□ -0.95
Hoxa3P02831 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Hoxa3P02831 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxa3P02831 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.09□□□□□ -0.95
Hoxa3P02831 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.09□□□□□ -0.95
Hoxa3P02831 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm31274-201ENSMUST00000197356 229 ntBASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm18035-201ENSMUST00000211962 589 ntBASIC9.08□□□□□ -0.96
Hoxa3P02831 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hoxa3P02831 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.08□□□□□ -0.96
Hoxa3P02831 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxa3P02831 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxa3P02831 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms