Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm40414-201ENSMUST00000197608 481 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm44551-201ENSMUST00000208804 171 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm1821-202ENSMUST00000227415 750 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pcdh1F7BJK1 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm12986-201ENSMUST00000119037 967 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm7666-201ENSMUST00000146631 819 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm43084-201ENSMUST00000200696 947 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm44155-201ENSMUST00000203923 412 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 AC155266.1-201ENSMUST00000220762 904 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.71□□□□□ -0.86
Pcdh1F7BJK1 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm9133-201ENSMUST00000118289 540 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm11836-201ENSMUST00000121022 441 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms