Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm13674-201ENSMUST00000121276 823 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SrfQ9JM73 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm4943-201ENSMUST00000132879 424 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm27316-201ENSMUST00000184884 277 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Tac1-205ENSMUST00000185187 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm6644-201ENSMUST00000186507 951 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm33080-201ENSMUST00000205429 172 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.54□□□□□ -0.72
SrfQ9JM73 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.54□□□□□ -0.72
SrfQ9JM73 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SrfQ9JM73 Gm44441-201ENSMUST00000203642 2475 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm9166-201ENSMUST00000120293 561 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm15530-201ENSMUST00000122206 555 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm15279-201ENSMUST00000155593 288 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Mir8111-201ENSMUST00000184463 137 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Wbp1-209ENSMUST00000205023 716 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm6290-201ENSMUST00000207666 1158 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm18043-201ENSMUST00000216741 739 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm18242-201ENSMUST00000218455 542 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SrfQ9JM73 A1cf-203ENSMUST00000224400 1204 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 AC183092.2-201ENSMUST00000225542 1153 ntBASIC10.53□□□□□ -0.72
SrfQ9JM73 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SrfQ9JM73 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms