Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC10.32□□□□□ -0.76
Ube4bQ9ES00 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm26670-201ENSMUST00000180429 3287 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm44189-201ENSMUST00000204387 3083 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 AC159819.3-201ENSMUST00000216940 1837 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm14130-201ENSMUST00000118417 987 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm6450-201ENSMUST00000200896 574 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Rps4l-202ENSMUST00000204242 789 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm45433-201ENSMUST00000209386 247 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm8913-201ENSMUST00000209491 641 ntBASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ube4bQ9ES00 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gm44926-201ENSMUST00000207898 1826 ntBASIC10.3□□□□□ -0.76
Ube4bQ9ES00 AC123534.1-202ENSMUST00000224256 1837 ntBASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Mir7677-201ENSMUST00000184226 67 ntBASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.3□□□□□ -0.76
Ube4bQ9ES00 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms