Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm13981-201ENSMUST00000122360 447 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm9574-201ENSMUST00000173127 845 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm7985-201ENSMUST00000183329 981 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm27440-201ENSMUST00000184785 107 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Ighv5-8-202ENSMUST00000191967 337 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm37723-201ENSMUST00000194480 565 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm37301-201ENSMUST00000195412 568 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm43564-201ENSMUST00000196185 211 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.18□□□□□ -0.14
U2af1Q9D883 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 AC154528.2-201ENSMUST00000228432 3023 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm12947-201ENSMUST00000116114 420 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm11475-201ENSMUST00000118482 476 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm15031-201ENSMUST00000121341 210 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm12950-201ENSMUST00000121683 417 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm22876-201ENSMUST00000175450 298 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.17□□□□□ -0.14
U2af1Q9D883 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
U2af1Q9D883 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
U2af1Q9D883 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC14.16□□□□□ -0.14
U2af1Q9D883 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
U2af1Q9D883 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
U2af1Q9D883 Gm37697-201ENSMUST00000195680 1844 ntBASIC14.16□□□□□ -0.14
U2af1Q9D883 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Gm24346-201ENSMUST00000158712 194 ntBASIC14.16□□□□□ -0.14
U2af1Q9D883 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.16□□□□□ -0.14
U2af1Q9D883 Gm20414-201ENSMUST00000172918 646 ntBASIC14.16□□□□□ -0.14
U2af1Q9D883 Gm44640-201ENSMUST00000206894 247 ntBASIC14.16□□□□□ -0.14
U2af1Q9D883 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC14.16□□□□□ -0.14
U2af1Q9D883 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.16□□□□□ -0.14
U2af1Q9D883 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
U2af1Q9D883 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Gm8752-201ENSMUST00000173427 1694 ntBASIC14.16□□□□□ -0.14
U2af1Q9D883 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
U2af1Q9D883 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms