Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm16104-201ENSMUST00000156260 401 ntTSL 2 BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Gm28281-201ENSMUST00000185658 187 ntBASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.63□□□□□ -0.71
Cdh23Q99PF4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm22582-201ENSMUST00000102283 94 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm5435-201ENSMUST00000179295 1150 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm9553-201ENSMUST00000185703 996 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Apoc3-201ENSMUST00000034586 526 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Cldn8-201ENSMUST00000049697 2356 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Depdc1b-205ENSMUST00000171178 1404 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm13975-201ENSMUST00000119253 782 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 CT025579.2-201ENSMUST00000225280 816 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm8420-201ENSMUST00000097103 598 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm23220-201ENSMUST00000158115 137 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm4398-201ENSMUST00000182698 992 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm42599-201ENSMUST00000201308 469 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Gm26397-201ENSMUST00000083703 134 ntBASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdh23Q99PF4 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Olfr452-202ENSMUST00000214465 1967 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Gm13361-201ENSMUST00000119977 1431 ntBASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Gm25723-201ENSMUST00000104530 126 ntBASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Gm32858-201ENSMUST00000205246 585 ntBASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.61□□□□□ -0.71
Cdh23Q99PF4 Gm24352-201ENSMUST00000158966 125 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms