Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Mir704-201ENSMUST00000102106 77 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm14524-201ENSMUST00000121066 683 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm23899-201ENSMUST00000158112 90 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm2328-201ENSMUST00000193525 535 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 CR974487.1-201ENSMUST00000220984 413 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm6378-201ENSMUST00000084199 444 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm38111-201ENSMUST00000194817 2741 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm24981-201ENSMUST00000104459 132 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm15661-201ENSMUST00000117390 556 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm6881-201ENSMUST00000121811 833 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm23521-201ENSMUST00000177845 110 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm5801-201ENSMUST00000182247 780 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm3379-201ENSMUST00000222259 642 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 AC163351.1-201ENSMUST00000225539 737 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Gm7001-201ENSMUST00000219384 1465 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx54Q8K4L0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms