Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm44155-201ENSMUST00000203923 412 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cchcr1Q8K2I2 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm25554-201ENSMUST00000158075 113 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm6407-201ENSMUST00000176468 549 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm18561-201ENSMUST00000206027 804 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cchcr1Q8K2I2 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm12274-201ENSMUST00000120062 385 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 B9d1os-201ENSMUST00000137010 674 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm43520-201ENSMUST00000197996 164 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Gm33080-201ENSMUST00000205429 172 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cchcr1Q8K2I2 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms