Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm12030-201ENSMUST00000121917 223 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm26976-201ENSMUST00000182929 908 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm42660-201ENSMUST00000197733 947 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm8170-201ENSMUST00000218581 945 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trub1Q8C0D0 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm22379-201ENSMUST00000157480 131 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm44551-201ENSMUST00000208804 171 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm7319-201ENSMUST00000210047 778 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms